p-value: | 1e-13 |
log p-value: | -3.079e+01 |
Information Content per bp: | 1.911 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.71% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 32.6 +/- 23.0bp |
Average Position of motif in Background | 38.9 +/- 10.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTAAGGTACTTT---- TTCNAAGTACTTNNNNN |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGTAAGGTACTTT--- NATTTAAGTACTTANNA |
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PH0116.1_Nkx2-9/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTAAGGTACTTT---- TTTTAAGTACTTAAATT |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTAAGGTACTTT--- CTTTAAGTACTTAATG |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGTAAGGTACTTT- ----AAGCACTTAA |
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Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer
Match Rank: | 6 |
Score: | 0.53 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------TGTAAGGTACTTT ACTYKNATTCGTGNTACTTC |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TGTAAGGTACTTT- ---CAGGTAAGTAT |
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PH0105.1_Meis3/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGTAAGGTACTTT GTATTGACAGGTNNTT- |
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PB0134.1_Hnf4a_2/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGTAAGGTACTTT---- -NNATTGGACTTTNGNN |
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PH0053.1_Hoxa6/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGTAAGGTACTTT---- -NTNAGGTAATTACCTT |
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