Information for 5-GCTGTCCTCTGCTGAA (Motif 4)

T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A
Reverse Opposite:
C G A T A C G T A G T C C G T A A C T G T A G C C T G A T A C G T C G A C A T G C T A G T G C A G T A C C T G A A C T G A T G C
p-value:1e-21
log p-value:-4.986e+01
Information Content per bp:1.749
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 26.1bp
Average Position of motif in Background46.0 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTGTCCTCTGCTGAA-
--TGWCCTCARNTGACC
 T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A A C G T
A C G T A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.56
Offset:9
Orientation:forward strand
Alignment:GCTGTCCTCTGCTGAA---
---------TGCTGACTCA
 T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTGTCCTCTGCTGAA---
--TGACCTTTCGTGACCTT
 T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A A C G T A C G T A C G T
A C G T A C G T A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCTGTCCTCTGCTGAA
----CCCCCTGCTGTG
 T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCTGTCCTCTGCTGAA
-----AATTTGCTGAC
 T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A
A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCTGTCCTCTGCTGAA--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTCCTCTGCTGAA--
TAGCGCCCCCTGGTGGCCA
 A C G T T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCTGTCCTCTGCTGAA-
--GGCCYCCTGCTGDGH
 T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCTGTCCTCTGCTGAA
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCTGTCCTCTGCTGAA---
-CTGNNNNNNNCAGATAAG
 T A C G G T A C A G C T C A T G A C G T A G T C G T A C A G C T A T G C A G C T A C T G A G T C A C G T A C T G G T C A G C T A A C G T A C G T A C G T
A C G T T A G C C G A T A C T G A G T C C G A T A G T C A T G C C A G T A G T C T G C A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A C T G