Information for 7-SATTTMTAAS (Motif 5)

A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C
Reverse Opposite:
T A C G C G A T C G A T T C G A A C G T C G T A G T C A T G C A G C A T T A G C
p-value:1e-17
log p-value:-4.086e+01
Information Content per bp:1.452
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.2 +/- 30.0bp
Average Position of motif in Background48.5 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-SATTTMTAAS-
DGWTTTATGRCN
 A C G T A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--SATTTMTAAS-
NTGATTTATGGCC
 A C G T A C G T A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:SATTTMTAAS
NTTTTACGAC
 A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:SATTTMTAAS-
NTTTTATTACN
 A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-SATTTMTAAS-
TGATTTATGGCC
 A C G T A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------SATTTMTAAS-
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----SATTTMTAAS
CNGTGATTTN----
 A C G T A C G T A C G T A C G T A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:SATTTMTAAS-
-TTTTATTRGN
 A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:SATTTMTAAS
NTTTTACGAC
 A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:SATTTMTAAS
NTTTTATGAC
 A T C G C G T A A C G T C A G T G C A T T G C A A G C T G C T A C G T A A T G C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C