Information for 10-CGGCAATTGTCGC (Motif 4)

A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C
Reverse Opposite:
A T C G A T G C A T C G C T G A A G T C T C G A T C G A G A C T A C G T A T C G A G T C A G T C T A C G
p-value:1e-19
log p-value:-4.471e+01
Information Content per bp:1.702
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.2 +/- 28.4bp
Average Position of motif in Background78.2 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0024.1_Dlx5/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGGCAATTGTCGC--
GGGGTAATTAGCTCTG
 A C G T A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C A C G T A C G T
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

PH0022.1_Dlx3/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAATTGTCGC--
NNNGGTAATTATNGNGN
 A C G T A C G T A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGCAATTGTCGC
-GGGAATTGTAGT
 A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAATTGTCGC--
GTCGGTAATTATNGNGN
 A C G T A C G T A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PH0009.1_Bsx/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGCAATTGTCGC--
CAGGTAATTACCTCAG
 A C G T A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C A C G T A C G T
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAATTGTCGC
CACGGCAGTTGGTNN
 A C G T A C G T A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PH0109.1_Nkx1-1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGGCAATTGTCGC-
NCCCACTAATTAGCGCA
 A C G T A C G T A C G T A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C A C G T
A G C T G T A C A T G C G A T C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G T C A C T G A T G C G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGGCAATTGTCGC
---CCATTGTTNY
 A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

SOX4/MA0867.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGGCAATTGTCGC
AACACTGCAATTGTTC-
 A C G T A C G T A C G T A C G T A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGCAATTGTCGC----
AATCAATTGTTCCGCTA
 A T G C T A C G C T A G A T G C C G T A C T G A A C G T A C G T C T A G A G C T T A G C A T C G A T G C A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A