Information for 9-TGAGCCAWWTTCA (Motif 3)

C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A
Reverse Opposite:
A C G T A C T G C T G A G T C A C G T A G C T A G A C T A C T G C T A G A T G C C G A T T G A C C G T A
p-value:1e-19
log p-value:-4.516e+01
Information Content per bp:1.707
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.7 +/- 27.8bp
Average Position of motif in Background40.0 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF::JUN/MA0462.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAGCCAWWTTCA
TGAGTCATTTC--
 C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCCAWWTTCA
ATGAGTCATNTNNT
 A C G T C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAGCCAWWTTCA
TGACCTARTT---
 C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGAGCCAWWTTCA------
--GACCACATTCATACAAT
 C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCCAWWTTCA
ATGASTCATH----
 A C G T C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGAGCCAWWTTCA-------
------ACATTCATGACACG
 C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCCAWWTTCA
ATGASTCATY----
 A C G T C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A
T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGAGCCAWWTTCA--
-----CGGTTTCAAA
 C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCCAWWTTCA
TTGACCTANTTATN
 A C G T C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGAGCCAWWTTCA
NDATGASTCATH----
 A C G T A C G T A C G T C G A T A C T G C G T A A T C G G A T C G T A C C T G A C G A T G C A T A C G T A G C T A G T C C G T A
C A T G C T A G T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A G C T G A T C A C G T A C G T A C G T A C G T