Information for 6-GTGCTGAARATRCAGC (Motif 3)

A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
Reverse Opposite:
C T A G T G A C C A G T T A C G G A T C T C G A G A C T G A C T A G C T A C G T G T A C C G T A A C T G T A G C C G T A A G T C
p-value:1e-21
log p-value:-4.953e+01
Information Content per bp:1.674
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.5 +/- 28.1bp
Average Position of motif in Background59.5 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGAARATRCAGC
AATTTGCTGAC--------
 A C G T A C G T A C G T A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGCTGAARATRCAGC
GGTGYTGACAGS-----
 A C G T A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGAARATRCAGC
AAAATGCTGACT-------
 A C G T A C G T A C G T A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTGCTGAARATRCAGC
AAANTGCTGACTNAG----
 A C G T A C G T A C G T A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTGCTGAARATRCAGC
NAAAANTGCTGACTCAGC---
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTGCTGAARATRCAGC
AAATTTGCTGACTTAGA---
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGAARATRCAGC
AAAWWTGCTGACWWD-----
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTGCTGAARATRCAGC
-TGCTGACTCA-----
 A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.56
Offset:-13
Orientation:reverse strand
Alignment:-------------GTGCTGAARATRCAGC
GGCGCTGTCCATGGTGCTGAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGCTGAARATRCAGC
--ACTGAAACCA----
 A C T G C G A T A C T G A G T C C G A T A C T G C G T A C T G A C T G A C T G A A G C T C T A G A G T C G C T A A C T G G A T C
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T