Information for 13-CTGTTAGACT (Motif 15)

A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C A C G T C G T A C G T A A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.071e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 23.0bp
Average Position of motif in Background47.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGTTAGACT
AGGTGHCAGACA
 A C G T A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTAGACT-
AGGTGNCAGACAG
 A C G T A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGTTAGACT
BRRCVGTTDN---
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTTAGACT
GCTGTTACCCT
 A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTGTTAGACT-
---BCAGACWA
 A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

MYBL2/MA0777.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGTTAGACT---
AACCGTTAAACGGTC
 A C G T A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGTTAGACT
GCTGTG-----
 A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CTGTTAGACT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGTTAGACT
TGGCAGTTGG---
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGTTAGACT
GGCVGTTR----
 A C G T A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G C G T A A G T C A C G T
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T