Information for 6-GTGCTGGACAGAGAAY (Motif 4)

A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
Reverse Opposite:
C T A G C G A T G C A T G T A C A C G T G T A C A C G T A C T G A C G T A G T C A G T C C G T A A C T G A G T C C T G A A T G C
p-value:1e-18
log p-value:-4.311e+01
Information Content per bp:1.859
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 24.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTGCTGGACAGAGAAY
WDNCTGGGCA------
 A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGCTGGACAGAGAAY
AGGTGNCAGACAG-----
 A C G T A C G T A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTGCTGGACAGAGAAY
NTGATTGACAGN----
 A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTGCTGGACAGAGAAY
----TTGACAGC----
 A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGCTGGACAGAGAAY
AGGTGHCAGACA------
 A C G T A C G T A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GTGCTGGACAGAGAAY
----TTGACAGG----
 A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GTGCTGGACAGAGAAY
----GGAACAAAGR--
 A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GTGCTGGACAGAGAAY
-AGATGKDGAGATAAG
 A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTGCTGGACAGAGAAY
BTGABTGACAGS----
 A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GTGCTGGACAGAGAAY
GGGGCTYGKCTGGGA--
 A C G T A T C G A G C T A C T G A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A G A T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T