Information for 7-TTCTCACCATKCG (Motif 4)

A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
Reverse Opposite:
A T G C A C T G G T A C T C G A G C A T A C T G A T C G A C G T A C T G C G T A A C T G C G T A C G T A
p-value:1e-15
log p-value:-3.658e+01
Information Content per bp:1.816
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 22.7bp
Average Position of motif in Background67.8 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTCTCACCATKCG
ATTAACACCT----
 A C G T A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTCTCACCATKCG
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTCTCACCATKCG
TTCACACCTT---
 A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCTCACCATKCG
TTMACACCTT---
 A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCTCACCATKCG
NTTTTCACACCTT---
 A C G T A C G T A C G T A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCACCATKCG
TTTCACACCT----
 A C G T A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCACCATKCG
TTTCACACCTN---
 A C G T A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCACCATKCG
KTTCACACCT----
 A C G T A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCACCATKCG
CTTCACACCTA---
 A C G T A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTCTCACCATKCG
HTTTCCCASG-----
 A C G T A C G T A C G T C G A T A G T C A C G T A G T C C G T A A T G C A G T C C G T A A G C T A C T G G T A C A T C G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T