Information for 9-GCAGGBGCHGACA (Motif 8)

A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G T A A C T G A G T C T C G A A G T C A T G C A C G T A T C G A G T C
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.850
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.4 +/- 19.8bp
Average Position of motif in Background38.0 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGBGCHGACA
SDGCAGGTGCNS---
 A C G T A C G T A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCAGGBGCHGACA--
---GGTGYTGACAGS
 A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCAGGBGCHGACA
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCAGGBGCHGACA----
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T A C G T A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GCAGGBGCHGACA-
-------TTGACAG
 A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

TP73/MA0861.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGGBGCHGACA----
GACATGTCTGGACATGTC
 A C G T A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A A C G T A C G T A C G T A C G T
C A T G T C G A A G T C C T G A C G A T T A C G G A C T G A T C A G C T C T A G C T A G C T G A A G T C C G T A G A C T A T C G G A C T G T A C

HES7/MA0822.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGBGCHGACA
TGGCACGTGCCA---
 A C G T A C G T A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGBGCHGACA
GCGCATGCGCAG---
 A C G T A C G T A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGGBGCHGACA
AACAGGTGT-----
 A C G T A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCAGGBGCHGACA--
-----VGCTGWCAVB
 A C T G A T G C C G T A A T C G A C T G A C G T C T A G A G T C G A C T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C