Information for 5-CTSTCCAGTGCTGAAA (Motif 4)

A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A
Reverse Opposite:
G A C T A C G T A G C T G T A C C G T A T A C G G T A C T G C A G A T C G C A T A C T G C A T G T C G A T A G C C G T A T C A G
p-value:1e-22
log p-value:-5.239e+01
Information Content per bp:1.644
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif146.1
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets48.2 +/- 26.6bp
Average Position of motif in Background52.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTSTCCAGTGCTGAAA
NANTTTCAAGTGGTTAN-
 A C G T A C G T A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CTSTCCAGTGCTGAAA--
------GGTGYTGACAGS
 A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTSTCCAGTGCTGAAA
--NTCAAGTGG-----
 A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTSTCCAGTGCTGAAA--
-CGAACAGTGCTCACTAT
 A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A A C G T A C G T
A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTSTCCAGTGCTGAAA
--NTCAAGTGGN----
 A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTSTCCAGTGCTGAAA
--CTYRAGTGSY----
 A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTSTCCAGTGCTGAAA
--BTBRAGTGSN----
 A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTSTCCAGTGCTGAAA
---TTRAGTGSYK---
 A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTSTCCAGTGCTGAAA
NNNANTGCAGTGCNNTT-
 A C G T A C G T A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTSTCCAGTGCTGAAA
NNNNTGCCAGTGATTG--
 A C G T A C G T A G T C A C G T A T C G A G C T G T A C G T A C C G T A C T A G A C G T A C T G A T G C A C G T C A T G T C G A G T C A C G T A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T