Information for 12-CSCCRKCRWSAGC (Motif 10)

A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A T G C G C T A A G T C A C T G G T A C A G T C A C T G C T A G A T C G A C T G
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.830
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.6 +/- 25.7bp
Average Position of motif in Background47.3 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.60
Offset:9
Orientation:forward strand
Alignment:CSCCRKCRWSAGC-
---------CAGCC
 A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CSCCRKCRWSAGC-----
-------GTCAGCANNTN
 A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CSCCRKCRWSAGC
TCCCCA--------
 A C G T A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CSCCRKCRWSAGC-----
------NGTCAGCANTTT
 A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CSCCRKCRWSAGC--
TGCCTGCGYCMCCTT
 A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CSCCRKCRWSAGC---
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:7
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CSCCRKCRWSAGC---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CSCCRKCRWSAGC--
---CAACGTCCGCGG
 A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CSCCRKCRWSAGC
TCCGCCCCCGCATT---
 A C G T A C G T A C G T A C G T A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CSCCRKCRWSAGC
GTCCGCCATTA-----
 A C G T A C G T A C G T A G T C A T G C A G T C A G T C C T A G A C T G A G T C C T A G C G A T A T C G C G T A A C T G A G T C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T