Information for 9-TTGMTTCAAA (Motif 12)

A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A
Reverse Opposite:
A C G T A C G T A C G T A C T G G T C A C G T A A C T G A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.563e+01
Information Content per bp:1.907
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif93.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets59.4 +/- 24.8bp
Average Position of motif in Background50.6 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS::JUN/MA0099.2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTGMTTCAAA
-TGAGTCA--
 A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTGMTTCAAA-
--NATTCAAAT
 A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

ATF4/MA0833.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGMTTCAAA-
TATTGCATCATCC
 A C G T A C G T A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGMTTCAAA
CGGTTTCAAA
 A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGMTTCAAA
TTGCAACATN
 A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGMTTCAAA
ATTGCATCAK-
 A C G T A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTGMTTCAAA--
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTGMTTCAAA
ATTGCATCAT-
 A C G T A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGMTTCAAA
ATTGATTYND-
 A C G T A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGMTTCAAA
NTTGATACATT
 A C G T A C G T A C G T A C T G G T A C C G A T A C G T A G T C C G T A C G T A G T C A
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T