Information for 8-TGTAGTACAA (Motif 9)

A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A
Reverse Opposite:
C G A T A C G T A C T G A C G T C G T A G T A C A G C T G T C A A G T C C G T A
p-value:1e-10
log p-value:-2.359e+01
Information Content per bp:1.855
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.0 +/- 32.5bp
Average Position of motif in Background57.1 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTAGTACAA----
CCGTATTATAAACAA
 A C G T A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTAGTACAA---
---RNAACAATGG
 A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGTAGTACAA-
GGTCGTAAAAA
 A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGTAGTACAA------
TTAAGAACAATAAATT
 A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGTAGTACAA-------
TAGTGAACAATAGATTT
 A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGTAGTACAA-
-GTCGTAAAAA
 A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTAGTACAA----
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTAGTACAA---
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTAGTACAA---
NTTNAGAACAATTA
 A C G T A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGTAGTACAA------
TTTAGAACAATAAAAT
 A C G T A C T G C A G T C T G A C A T G A C G T G T C A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T