Information for 10-AGAGAACAAACAA (Motif 7)

C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A G C T A C G T C T A G G C A T A C G T A G T C A C G T G T A C A C G T
p-value:1e-11
log p-value:-2.644e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 30.5bp
Average Position of motif in Background47.8 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGAGAACAAACAA--
---AAACAAACATTC
 C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AGAGAACAAACAA--
----AATAAACAATN
 C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGAGAACAAACAA
---AAATAAACA-
 C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGAGAACAAACAA----
AAAAAGTAAACAAACAC
 C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGAGAACAAACAA----
AAAAAGTAAACAAACAC
 C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGAGAACAAACAA-----
--AAAGTAAACAAAAATT
 C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGAGAACAAACAA--
CAAAAGTAAACAAAG
 C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAGAACAAACAA-
AAATAAGAAAAAAC
 C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AGAGAACAAACAA
-----GTAAACAA
 C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A
A C G T A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAGAACAAACAA---
AGAAGAACAAAGGACTA
 A C G T C G T A A C T G C G T A C T A G G T C A C G T A A G T C C G T A C T G A C G T A A G T C G T C A C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A