Information for 12-CCTCTGCAGGGAA (Motif 8)

A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A
Reverse Opposite:
A C G T A G C T A G T C A G T C G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.211e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 12.8bp
Average Position of motif in Background54.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCTCTGCAGGGAA
-CACAGCAGGGGG
 A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTCTGCAGGGAA--
DCHCAGCAGGRGGCC
 A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTCTGCAGGGAA
DCTCAGCAGG---
 A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCTCTGCAGGGAA
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCTCTGCAGGGAA-
---CTTCTGGGAAA
 A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A A C G T
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCTCTGCAGGGAA
CCACACAGCAGGAGA
 A C G T A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTCTGCAGGGAA
CCACACAGCAGGAGA
 A C G T A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-9
Orientation:forward strand
Alignment:---------CCTCTGCAGGGAA
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCAGGGAA
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCTCTGCAGGGAA----
---TTTCCAGGAAATGG
 A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T A G A C T G C T G A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G