Information for 9-YASMMGGWGKCGC (Motif 5)

A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G G T A C A G T C C G T A A G T C A G T C A C T G A C G T A T C G A C G T C T A G
p-value:1e-13
log p-value:-3.038e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 24.0bp
Average Position of motif in Background57.6 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--YASMMGGWGKCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----YASMMGGWGKCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----YASMMGGWGKCGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:YASMMGGWGKCGC---
GCGGAGGTGTCGCCTC
 A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YASMMGGWGKCGC-----
---AAGGKGRCGCAGGCA
 A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:YASMMGGWGKCGC----
NNNAAGGGGGCGGGNNN
 A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:YASMMGGWGKCGC------
--NNNNTTGGCGCCGANNN
 A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---YASMMGGWGKCGC
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:YASMMGGWGKCGC
SDGCAGGTGCNS-
 A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:YASMMGGWGKCGC------
--NNNNTTGGCGCCGANNN
 A G T C C G T A A T G C G T C A G T A C A C T G A C T G C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G