Information for 4-TGGACAGCGC (Motif 2)

G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C
Reverse Opposite:
T A C G G T A C C A T G A T G C G A C T T C A G A C G T G A T C T G A C C T G A
p-value:1e-442
log p-value:-1.019e+03
Information Content per bp:1.552
Number of Target Sequences with motif423.0
Percentage of Target Sequences with motif47.26%
Number of Background Sequences with motif1011.6
Percentage of Background Sequences with motif2.15%
Average Position of motif in Targets47.1 +/- 20.8bp
Average Position of motif in Background50.8 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.66
Offset:-10
Orientation:forward strand
Alignment:----------TGGACAGCGC-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.65
Offset:-9
Orientation:reverse strand
Alignment:---------TGGACAGCGC-
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGACAGCGC
TTGACAGC--
 G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGACAGCGC
--CACAGN--
 G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGACAGCGC
GTGGAT-----
 A C G T G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGGACAGCGC
----CAGCC-
 G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGGACAGCGC---
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGGACAGCGC---
GTATTGACAGCTNNTT
 A C G T A C G T A C G T G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGGACAGCGC
CCAGGAACAG---
 A C G T A C G T A C G T G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGACAGCGC
AATGGAAAAT--
 A C G T A C G T G A C T A C T G C T A G T G C A A G T C C T G A T A C G G T A C C A T G A T G C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T