Information for 8-CCACCAGGGGGCAGCA (Motif 7)

A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
G A C T A C T G A G T C A C G T A C T G G T A C A G T C T A G C A G T C A G T C A C G T C T A G T A C G A C G T A C T G C T A G
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.843
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.9 +/- 13.1bp
Average Position of motif in Background53.3 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGGGGGCAGCA-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGGGGGCAGCA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGGGGCAGCA---
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGGGGCAGCA
DCHCAGCAGGRGGCC---
 A C G T A C G T A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCACCAGGGGGCAGCA
TCACCTCTGGGCAG--
 A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCACCAGGGGGCAGCA
CACAGCAGGGGG-----
 A C G T A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCACCAGGGGGCAGCA
----CAAAGGTCAG--
 A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCACCAGGGGGCAGCA
-----AGRGGTCA---
 A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:CCACCAGGGGGCAGCA----
---------GTCAGCANNTN
 A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCACCAGGGGGCAGCA--
-GGCGAGGGGTCAAGGGC
 A G T C A G T C C G T A A G T C A G T C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C