Information for 17-ACACAGCAAGSGC (Motif 14)

C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C
Reverse Opposite:
A T C G A G T C A T G C A G T C A C G T C G A T A C T G T A G C C G A T T A C G A G C T A T C G G C A T
p-value:1e-7
log p-value:-1.840e+01
Information Content per bp:1.719
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif121.2
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets51.3 +/- 22.8bp
Average Position of motif in Background48.4 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAAGSGC
CCACACAGCAGGAGA
 A C G T A C G T C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAAGSGC
CCACACAGCAGGAGA
 A C G T A C G T C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAAGSGC
GAGCACAGCAGGACA
 A C G T A C G T C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACACAGCAAGSGC
-CACAGCAGGGGG
 C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACACAGCAAGSGC
DCTCAGCAGG---
 C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACACAGCAAGSGC--
DCHCAGCAGGRGGCC
 C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ACACAGCAAGSGC---
------CAAGGHCANV
 C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACACAGCAAGSGC
-CACAGN------
 C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACACAGCAAGSGC
--ACAGGAAGTG-
 C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACACAGCAAGSGC
TGAGTCAGCA-----
 A C G T A C G T C G T A T A G C C T G A A G T C C G T A A T C G G T A C G C T A C G T A A C T G T A C G T A C G A T G C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T