Information for 3-CCMCMAGRKRGCA (Motif 4)

T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A
Reverse Opposite:
G C A T A T C G A T G C G A T C G T A C G A T C A T G C A C G T C A T G C A T G A C T G C A T G A C T G
p-value:1e-14
log p-value:-3.327e+01
Information Content per bp:1.637
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif126.1
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets55.8 +/- 19.6bp
Average Position of motif in Background47.8 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CCMCMAGRKRGCA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CCMCMAGRKRGCA------
GCCASCAGGGGGCGCYVNNG
 A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CCMCMAGRKRGCA---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCMCMAGRKRGCA
CCCCCCCGGGGGNN
 A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

GLIS1/MA0735.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCMCMAGRKRGCA
AGACCCCCCACGAAGC-
 A C G T A C G T A C G T A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCMCMAGRKRGCA
NCCCCCCCGGGGGGN
 A C G T A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCMCMAGRKRGCA
ACCCCCCCGGGGGGN
 A C G T A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

GLIS3/MA0737.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCMCMAGRKRGCA
GACCCCCCACGAAG--
 A C G T A C G T A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCMCMAGRKRGCA
GGCACCCAGGGGTGC-
 A C G T A C G T A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCMCMAGRKRGCA
GACCCCCCGCGAAG--
 A C G T A C G T A C G T T G A C G A T C T G A C G A T C G T A C G T C A T A C G C T A G C A T G C T A G A T C G T A G C C G T A
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T A C G T