Information for 6-GAGCAAAGGA (Motif 20)

A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A
Reverse Opposite:
A C G T A G T C G T A C C G A T A C G T C G A T A C T G A T G C G A C T A T G C
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.824
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif314.7
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets59.6 +/- 22.7bp
Average Position of motif in Background48.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GAGCAAAGGA---
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GAGCAAAGGA---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GAGCAAAGGA---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GAGCAAAGGA---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GAGCAAAGGA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAAAGGA
GGAACAAAGR-
 A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GAGCAAAGGA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GAGCAAAGGA
AAAGATCAAAGG-
 A C G T A C G T A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GAGCAAAGGA--
AAAGATCAAAGGGTT
 A C G T A C G T A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAGCAAAGGA-
ACATCAAAGGNA
 A C G T A T C G C T G A T A C G A G T C G C T A T G C A C G T A C A T G C T A G G T C A A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A