Information for 9-GGAMSTCTAGKST (Motif 5)

C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
Reverse Opposite:
C G T A A T G C G T C A A G T C A C G T C G T A A C T G C T G A A T C G A C T G A C G T A G T C G A T C
p-value:1e-13
log p-value:-3.059e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 21.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAMSTCTAGKST
GGGAATTGTAGT--
 A C G T C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------GGAMSTCTAGKST
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGAMSTCTAGKST
---CGTCTAGACA
 C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:4
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------GGAMSTCTAGKST
GCATTCTGGGAATTGTAGTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GGAMSTCTAGKST
TTAAGAGGAAGTTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGAMSTCTAGKST
VBSYGTCTGG---
 C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GGAMSTCTAGKST
ACVAGGAAGT-------
 A C G T A C G T A C G T A C G T C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGAMSTCTAGKST--
NNTNNTGTCTGGNNTNG
 A C G T A C G T C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GGAMSTCTAGKST
AVCAGGAAGT-------
 A C G T A C G T A C G T A C G T C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GGAMSTCTAGKST
DCCGGAARYN------
 A C G T A C G T A C G T C A T G A C T G C G T A G T A C A T G C A G C T A G T C A C G T C G T A A C T G A C G T A T C G A C G T
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T