Information for 11-AAAAGGGACA (Motif 19)

C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
p-value:1e-5
log p-value:-1.296e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.4 +/- 25.1bp
Average Position of motif in Background59.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGGACA----
AGAAAGTGAAAGTGA
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAAGGGACA-
-CCAGGAACAG
 C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAAGGGACA--
GAAAGTGAAAGT
 C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGGGACA
NNATAAGGNN--
 A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGGACA-------
GGAAAGCGAAACCAAAAC
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAAGGGACA--
GAAAGTGAAAGT
 C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGGACA---
GAGAACCGAAACTG
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGGACA----
TCTCAAAGGTCACGAG
 A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAAGGGACA--
GAAASYGAAASY
 C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAGGGACA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A