p-value: | 1e-7 |
log p-value: | -1.616e+01 |
Information Content per bp: | 1.937 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.72% |
Number of Background Sequences with motif | 12.9 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 35.3 +/- 20.2bp |
Average Position of motif in Background | 48.0 +/- 25.9bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATCTATACAG DGATCRATAN-- |
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CUX1/MA0754.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATCTATACAG TAATCGATAA-- |
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CUX2/MA0755.1/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATCTATACAG TAATCGATAA-- |
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SMAD3/MA0795.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATCTATACAG CGTCTAGACA- |
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POL012.1_TATA-Box/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------ATCTATACAG NNNNNNCTTTTATAN-- |
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TBP/MA0108.2/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------ATCTATACAG NNNNNNCTTTTATAN-- |
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ONECUT1/MA0679.1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----ATCTATACAG AAAAAATCGATAAT- |
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ONECUT2/MA0756.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----ATCTATACAG AAAAAATCGATAAT- |
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PB0163.1_Six6_2/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----ATCTATACAG-- ATGGGATATATCCGCCT |
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PB0080.1_Tbp_1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----ATCTATACAG- NANTTATATATAANGN |
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