Information for 9-TGCGCTTTGC (Motif 19)

A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A C G T A C G T A A C T G A G T C T A C G A G T C C G T A
p-value:1e-12
log p-value:-2.852e+01
Information Content per bp:1.794
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.95%
Number of Background Sequences with motif72.6
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets49.2 +/- 28.6bp
Average Position of motif in Background49.1 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCGCTTTGC-----
TGGACTTTGNNCTCN
 A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCGCTTTGC------
TGGACTTTGNNCTNTG
 A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCGCTTTGC----
TGACCTTTGCCCTA
 A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCGCTTTGC
CTGACCTTTG-
 A C G T A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCGCTTTGC
GGGGATTTCC
 A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCGCTTTGC-----
TGACCTTTGCCCTAN
 A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCGCTTTGC----
TGACCTTTGCCCCA
 A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCGCTTTGC--
TGACCTTTNCNT
 A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGCGCTTTGC--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGCGCTTTGC-
---ACATTCCA
 A C G T T C A G A T G C C T A G A G T C G C A T A C G T A C G T A T C G A G T C A C G T
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A