Information for 4-GYKGCTYTKYRCMCGY (Motif 6)

A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C
Reverse Opposite:
C T A G A T G C A C T G A C T G A C T G A G T C C T G A G T A C C G T A C T G A C G T A A C T G A G T C G T A C C T A G A G T C
p-value:1e-11
log p-value:-2.607e+01
Information Content per bp:1.798
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.3 +/- 29.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GYKGCTYTKYRCMCGY---
---NNTTTGCACACGGCCC
 A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GYKGCTYTKYRCMCGY---
-----TTTGCACACGGCAC
 A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GYKGCTYTKYRCMCGY
--NGCTN---------
 A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:GYKGCTYTKYRCMCGY--
----------GCACGTNC
 A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GYKGCTYTKYRCMCGY
---YCTTTGTTCC---
 A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GYKGCTYTKYRCMCGY
NCCGTTGCTANGNGN----
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:GYKGCTYTKYRCMCGY--
----------GCACGTAY
 A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:GYKGCTYTKYRCMCGY---
--------GTACCCGCATN
 A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:GYKGCTYTKYRCMCGY---
---------TACCCGCATN
 A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.48
Offset:11
Orientation:reverse strand
Alignment:GYKGCTYTKYRCMCGY-
-----------CACGCA
 A C T G A G T C A C T G A C T G G T A C A C G T A G C T A C G T A C T G A G C T C T A G A G T C G T A C A G T C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A