Information for 9-GAGATCACAA (Motif 34)

A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C
p-value:1e-1
log p-value:-4.259e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 27.8bp
Average Position of motif in Background42.6 +/- 2.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGATCACAA
AAGGTCAC--
 A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGATCACAA
-AGATAASR-
 A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T

GATA2/MA0036.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAGATCACAA---
NCAGATAAGAANNN
 A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GAGATCACAA------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGATCACAA
NAAACCACAG
 A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGATCACAA--
NWAACCACADNN
 A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGATCACAA------
-ATGTCACAACAACAC
 A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGATCACAA----
AAAGATCAAAGGGTT
 A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

GATA5/MA0766.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGATCACAA
-AGATAAGA-
 A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGATCACAA
AGRGGTCA---
 A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T