Information for 5-AATCCCGCMT (Motif 25)

C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T
Reverse Opposite:
C G T A C A G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T
p-value:1e-8
log p-value:-1.911e+01
Information Content per bp:1.892
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets67.7 +/- 25.5bp
Average Position of motif in Background60.3 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AATCCCGCMT
TAATCCCN---
 A C G T C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCCGCMT
GNNAGCTAATCCCCCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AATCCCGCMT--
TTTCCCGCCMAV
 C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T A C G T A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AATCCCGCMT
NYTTCCCGCC-
 A C G T C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AATCCCGCMT
CTTAATCCC----
 A C G T A C G T A C G T C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AATCCCGCMT-
-TTCCCGCCWG
 C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T A C G T
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AATCCCGCMT
TTAATCCC----
 A C G T A C G T C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AATCCCGCMT
NYTAATCCYB---
 A C G T A C G T A C G T C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.70
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCCGCMT
NANANTTAATCCCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0122.1_Obox2/Jaspar

Match Rank:10
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------AATCCCGCMT-
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A C T A G T C A G T C A G T C A C T G A G T C G T C A C G A T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A