Information for 13-ATTGTATTACAACAGA (Motif 20)

C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A T C G A C G T C G A T A T C G C G A T C G T A C G T A C G A T C G T A A G T C C G T A C T G A A C G T
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.8 +/- 24.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATTGTATTACAACAGA
--AATATTAATAAAGA
 C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATTGTATTACAACAGA
-CCGTATTATAAACAA
 C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATTGTATTACAACAGA
TTCAATTGTTCTAAAA----
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATTGTATTACAACAGA
ATTGTTTAN-------
 C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.56
Offset:-9
Orientation:reverse strand
Alignment:---------ATTGTATTACAACAGA
TNNANNTCTATTGTTNTNNANN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ATTGTATTACAACAGA
NNNTATTGAATTGNNN----
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATTGTATTACAACAGA
ATTGTTA---------
 C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTACAACAGA
CCATTGTATGCAAAT---
 A C G T A C G T C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTACAACAGA
TAATTGTTCTAAAC----
 A C G T A C G T C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTATTACAACAGA
CNNNTATTGTTCNNNNN----
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A T G C C G T A C G T A A T G C C G T A A C T G C G T A
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A A C G T A C G T A C G T A C G T