Information for 8-AGAAGAGTTAATAGAA (Motif 11)

C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G T A C G T A A G T C A C G T A T G C A G C T A C G T A T G C C G A T
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.899
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 23.1bp
Average Position of motif in Background45.6 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGAAGAGTTAATAGAA
--AGGTGTTAAT----
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGAAGAGTTAATAGAA
---WAAGTAAAYA---
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A
A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGAAGAGTTAATAGAA-----
----AATGCAATAAAATTTAT
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0046.1_Hoxa10/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGAAGAGTTAATAGAA----
----TAGGTAATAAAATTCA
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PH0012.1_Cdx1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGAAGAGTTAATAGAA---
---TAAGGTAATAAAATTA
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PB0109.1_Bbx_2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAAGAGTTAATAGAA--
-TGATTGTTAACAGTTGG
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A A C G T A C G T
A C G T G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGAAGAGTTAATAGAA----
----CTACCAATAAAATTCT
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGAAGAGTTAATAGAA---
---AAAGGTAATAAAATTT
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAAGAGTTAATAGAA
-NCWRWGTAAACANSV
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A
A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGAAGAGTTAATAGAA
---AAAGTAAACA---
 C G T A A T C G C G T A C T G A A T C G C G T A A C T G A C G T C G A T C G T A C G T A A C G T G T C A T C A G C G T A C G T A
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T