Information for 20-CGGCGAGGTCGCA (Motif 45)

A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G C G T A A G T C A G T C A C G T A G T C A C T G A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.228e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 24.3bp
Average Position of motif in Background30.4 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGGCGAGGTCGCA
CAGTGTGGTCGC-
 A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGCGAGGTCGCA
-GGCGCGCT----
 A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGAGGTCGCA
NANAAGGGCGTGGTC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGAGGTCGCA
NNAGGGGCGGGGTNNA-
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGGCGAGGTCGCA---
GCGGCGATATCGCAGCG
 A C G T A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGCGAGGTCGCA
-TCGGTGGTCGCN
 A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A
A C G T A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

CREB3L1/MA0839.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGGCGAGGTCGCA-
TGATGACGTGGCAN
 A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A A C G T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGGCGAGGTCGCA
--TCAAGGTCAN-
 A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGCGAGGTCGCA-
NGATGACGTGGCAN
 A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A A C G T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGCGAGGTCGCA
---AGRGGTCA--
 A G T C A C T G A C T G A G T C A C T G C G T A A C T G A C T G A C G T A G T C A C T G A G T C C G T A
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T