Information for 13-TGCGAGGASA (Motif 42)

C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A
Reverse Opposite:
A C G T A T G C A G C T A G T C A G T C A G C T A G T C A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.639e+01
Information Content per bp:1.875
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif63.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets48.6 +/- 27.8bp
Average Position of motif in Background50.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCGAGGASA--
KGTTGCTAGGMAACA
 A C G T A C G T A C G T C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCGAGGASA-
-GGGAGGACNG
 C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCGAGGASA
TGCGTG----
 C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCGAGGASA---
ANTGCGTGGGCGTNN
 A C G T A C G T C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A A C G T A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

EGR4/MA0733.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCGAGGASA---
AANTGCGTGGGCGTNN
 A C G T A C G T A C G T C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCGAGGASA
--TRAGGTCA
 C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TGCGAGGASA
NNGCNCTGCGCGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGCGAGGASA--
--CAAGGHCANV
 C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCGAGGASA
CATGCGGGTAC-
 A C G T A C G T C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCGAGGASA-
TGCGTGGGCGT
 C G A T A C T G A G T C A C T G C T G A A C T G A C T G C T G A A T C G G T C A A C G T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T