p-value: | 1e-8 |
log p-value: | -1.861e+01 |
Information Content per bp: | 1.749 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.82% |
Number of Background Sequences with motif | 10.0 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 59.2 +/- 32.7bp |
Average Position of motif in Background | 59.0 +/- 24.5bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0115.1_Nkx2-6/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGAGGCTAAGTGTATT- -AATNTTAAGTGGNTNN |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGAGGCTAAGTGTATT CAAAGGTCAAGGG---- |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGAGGCTAAGTGTATT- -AANTTCAAGTGGCTTN |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGAGGCTAAGTGTATT-- -NTNNTTAAGTGGTTANN |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGAGGCTAAGTGTATT- -AATTTCAAGTGGCTTN |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGAGGCTAAGTGTATT -----TTRAGTGSYK- |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AGAGGCTAAGTGTATT -----TTAAGTGGN-- |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGAGGCTAAGTGTATT-- -NTNNTTAAGTGGNTNAN |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGAGGCTAAGTGTATT- -AAATTCAAGTGGNTTN |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AGAGGCTAAGTGTATT -----TTAAGTGGT-- |
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