Information for 7-TTGGATACGA (Motif 33)

A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A
Reverse Opposite:
A C G T G T A C C T A G A C G T C G T A A C G T A G T C A G T C C G T A C G T A
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.2 +/- 20.1bp
Average Position of motif in Background68.4 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TTGGATACGA---
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.69
Offset:-8
Orientation:forward strand
Alignment:--------TTGGATACGA-----
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGGATACGA
ATTTGCATAT--
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTGGATACGA-
TACCCTAGTTACCGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGGATACGA
TGATTGGCTANN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TTGGATACGA
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TTGGATACGA
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PB0105.1_Arid3a_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTGGATACGA--
NNATNTGATANNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A A C G T A C G T
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGGATACGA
ATGMATATDC
 A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TTGGATACGA
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C T G G T C A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A