Information for 2-TAAGCACTKTGGMCAG (Motif 3)

G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G
Reverse Opposite:
G T A C C G A T C T A G A C T G A G T C A G T C C G T A T G A C T C G A A T C G C A G T A C T G A G T C A G C T A C G T C G T A
p-value:1e-13
log p-value:-3.186e+01
Information Content per bp:1.699
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.0 +/- 20.8bp
Average Position of motif in Background46.8 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TAAGCACTKTGGMCAG----
TTCAGCACCATGGACAGCGCC
 A C G T G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TAAGCACTKTGGMCAG----
TCAGCACCATGGACAGCTCC
 G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TAAGCACTKTGGMCAG
--------TTGGCA--
 G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TAAGCACTKTGGMCAG
--------GTGGAT--
 G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TAAGCACTKTGGMCAG-
--TGGACTTTGNNCTCN
 G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAAGCACTKTGGMCAG
--TCACCTCTGGGCAG
 G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G
A C G T A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TAAGCACTKTGGMCAG--
--TGGACTTTGNNCTNTG
 G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TAAGCACTKTGGMCAG
------CTGTGGTTTN
 G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TAAGCACTKTGGMCAG
-----WDNCTGGGCA-
 G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TAAGCACTKTGGMCAG
----NNHTGTGGTTWN
 G C A T G T C A C T G A A C T G G T A C G T C A A T G C A G C T A C T G A C G T A C T G A C T G T G A C A G T C C G T A C A T G
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G