Information for 15-VGYCCCMKGGGAC (Motif 22)

T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C
Reverse Opposite:
A T C G A G C T G T A C G A T C A G T C G T A C A C T G A C T G T C A G A C T G C T A G A T G C A G C T
p-value:1e-5
log p-value:-1.292e+01
Information Content per bp:1.722
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif115.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets46.2 +/- 28.8bp
Average Position of motif in Background51.5 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:VGYCCCMKGGGAC
NGTCCCNNGGGA-
 T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:VGYCCCMKGGGAC-
ATTCCCAAGGGAAT
 T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:VGYCCCMKGGGAC
GTCCCCAGGGGA-
 T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-VGYCCCMKGGGAC-
ACCCCCCCGGGGGGN
 A C G T T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-VGYCCCMKGGGAC-
NCCCCCCCGGGGGGN
 A C G T T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:VGYCCCMKGGGAC-
CACCCCCGGGGGGG
 T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:VGYCCCMKGGGAC
TGCCCCAGGGCA-
 T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:VGYCCCMKGGGAC
TGCCCCAGGGCA-
 T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:VGYCCCMKGGGAC
TGCCCNGGGGCA-
 T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-VGYCCCMKGGGAC
TTGCCCTAGGGCAT
 A C G T T C G A A T C G A G T C G T A C A G T C A G T C G T A C A C T G A C T G C T A G A C T G C T G A A T G C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T