Information for 5-CGGSCGCCACGGGGCG (Motif 8)

A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G
Reverse Opposite:
A G T C A C T G T A G C A G T C A T G C A G T C A T C G A G C T A T C G A C T G A G T C C T A G A T G C A G T C G T A C A T C G
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.749
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.0 +/- 19.0bp
Average Position of motif in Background39.8 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGGSCGCCACGGGGCG------
--GCCASCAGGGGGCGCYVNNG
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGGSCGCCACGGGGCG---
TGGCCACCAGGGGGCGCTA
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PLAG1/MA0163.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGSCGCCACGGGGCG
-GGGGCCCAAGGGGG-
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G
A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGGSCGCCACGGGGCG
----TGCCCNGGGGCA
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G
A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGSCGCCACGGGGCG-
---GTGCCACGCGACTG
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G A C G T
A C G T A C G T A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGGSCGCCACGGGGCG
----TGTCAGGGGGCG
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G
A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGGSCGCCACGGGGCG
----NNCCACGTGG--
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G
A C G T A C G T A C G T A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGSCGCCACGGGGCG----
TGGCCACCAGGTGGCACTNT
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CGGSCGCCACGGGGCG
-----GCCACGTG---
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G
A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGGSCGCCACGGGGCG
----TGCCCTNGGGCA
 A T G C A C T G A C T G A T C G A G T C C T A G A G T C A T G C T C G A A T G C A C T G A T C G A C T G A C T G G T A C T A C G
A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A