Information for 12-GACAGCATCACCM (Motif 14)

A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
Reverse Opposite:
A C T G A C T G T A C G A C G T A C T G T C G A A C G T A C T G A G T C A C G T A T C G A C G T A G T C
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.804
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.2 +/- 23.9bp
Average Position of motif in Background45.9 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACAGCATCACCM
ADGGYAGYAGCATCT
 A C G T A C G T A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAGCATCACCM
TTGACAGC-------
 A C G T A C G T A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GACAGCATCACCM
AGCAACAGCCGCACC-
 A C G T A C G T A C G T A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACAGCATCACCM
CACAGN-------
 A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GACAGCATCACCM
TGAGTCAGCA------
 A C G T A C G T A C G T A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACAGCATCACCM
TTGACAGG-------
 A C G T A C G T A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GACAGCATCACCM
--CAGCC------
 A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACAGCATCACCM-
TGCCTGCGYCMCCTT
 A C G T A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACAGCATCACCM
TTGACAG--------
 A C G T A C G T A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GACAGCATCACCM
VBTGWCAGCB------
 A C G T A C G T A C G T A C T G G T C A A T G C C G T A A C T G A G T C G T C A A G C T A G T C G T C A A T G C T A G C G T A C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T