| p-value: | 1e-4 |
| log p-value: | -1.055e+01 |
| Information Content per bp: | 1.962 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 0.36% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 64.2 +/- 29.6bp |
| Average Position of motif in Background | 43.4 +/- 4.2bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.67 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
PH0148.1_Pou3f3/Jaspar
| Match Rank: | 1 |
| Score: | 0.68
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TCTGCATGAT---
AAAATATGCATAATAAA |
|
|
|
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TCTGCATGAT
ATTTGCATAA- |
|
|
|
POU2F2/MA0507.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.64
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TCTGCATGAT
TTCATTTGCATAT- |
|
|
|
POU2F1/MA0785.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TCTGCATGAT
AATTTGCATANT |
|
|
|
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 5 |
| Score: | 0.62
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TCTGCATGAT
BTVATTWGCATA-- |
|
|
|
Pou5f1::Sox2/MA0142.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TCTGCATGAT----
ATTTGCATAACAAAG |
|
|
|
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TCTGCATGAT
ATTGCATCAK |
|
|
|
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
| Match Rank: | 8 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TCTGCATGAT----
WYATGCATWATGCAT |
|
|
|
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer
| Match Rank: | 9 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TCTGCATGAT
ATTGCATCAT |
|
|
|
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 10 |
| Score: | 0.59
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | TCTGCATGAT---
-ATGCATAATTCA |
|
|
|
