Information for 13-TCATAACAAG (Motif 28)

A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T A C T G A G C T G A C T T C G A A C G T A C T G C G T A
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.847
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets42.7 +/- 24.2bp
Average Position of motif in Background32.7 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TCATAACAAG--
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCATAACAAG---
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCATAACAAG---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCATAACAAG
GTCGTAAAAT-
 A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCATAACAAG--
NTTNAGAACAATTA
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCATAACAAG---
AAAAATAACAAACGG
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCATAACAAG
GTCGTAAAAA-
 A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCATAACAAG
GTCATAAAAN-
 A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCATAACAAG
GTCATN-----
 A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCATAACAAG
ACATTCATGACACG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C T G A T A G C G T C A C G T A A C T G
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G