Information for 12-MGCTGTTGAG (Motif 26)

G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G
Reverse Opposite:
A G T C C G A T A T G C G T C A C G T A A T G C C G T A A C T G A G T C C A G T
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.797
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif87.1
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets51.0 +/- 26.2bp
Average Position of motif in Background48.8 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----MGCTGTTGAG---
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----MGCTGTTGAG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----MGCTGTTGAG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:MGCTGTTGAG
-GCTGTG---
 G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-MGCTGTTGAG
CAGCTGTT---
 A C G T G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--MGCTGTTGAG
CCAGCTGTTN--
 A C G T A C G T G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--MGCTGTTGAG
ACAGCTGTTV--
 A C G T A C G T G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T

MSC/MA0665.1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---MGCTGTTGAG
AACAGCTGTT---
 A C G T A C G T A C G T G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----MGCTGTTGAG
NNGCAGCTGTT---
 A C G T A C G T A C G T A C G T G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---MGCTGTTGAG
ATCAGCTGTT---
 A C G T A C G T A C G T G T C A C T A G A G T C A C G T A T C G C G A T A C G T T A C G C G T A A C T G
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T