Information for 5-TGCACWTTCTRAGGGA (Motif 7)

C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A
Reverse Opposite:
A G C T A G T C A G T C A G T C A C G T G A C T C G T A A T C G G C T A C G T A C G T A A T C G A C G T A C T G G T A C C G T A
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.733
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 20.0bp
Average Position of motif in Background25.6 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TGCACWTTCTRAGGGA
------TTCTNMGGAA
 C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGCACWTTCTRAGGGA
ACTTTCACTTTC-------
 A C G T A C G T A C G T C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCACWTTCTRAGGGA---
----ANTTCTCAGGAANNN
 C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCACWTTCTRAGGGA
SNGCACCTGCHS-----
 A C G T C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGCACWTTCTRAGGGA
NNTNCGCACCTGTNGAN---
 A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TGCACWTTCTRAGGGA--
------TTCTNNAGAANT
 C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGCACWTTCTRAGGGA
AGTTTCAGTTTC-------
 A C G T A C G T A C G T C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGCACWTTCTRAGGGA
--CACGTGNT------
 C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A
A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGCACWTTCTRAGGGA
-GCACGTAY-------
 C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGCACWTTCTRAGGGA
--CACTTCCTCT----
 C G A T A C T G A G T C C G T A A T G C G C A T A C G T C A G T A T G C C G A T C T G A C G T A T A C G C T A G C T A G C T G A
A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T