Information for 12-TTGTGGTGCTGCG (Motif 16)

A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
Reverse Opposite:
G T A C A C T G A G T C C G T A A C T G A G T C G T C A A G T C A G T C C G T A A G T C C G T A C G T A
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 25.6bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGGTGCTGCG
NNHTGTGGTTWN---
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTGTGGTGCTGCG
GCTGTGGTTT----
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTGTGGTGCTGCG
GTCTGTGGTTT----
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:4
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------TTGTGGTGCTGCG
ACTYKNATTCGTGNTACTTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGGTGCTGCG
NNTGTGGTTT----
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGGTGCTGCG
TTTGCGGTTT----
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTGTGGTGCTGCG
--GTGGAT-----
 A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGTGGTGCTGCG
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGTGGTGCTGCG
CTGTGGTTTN---
 A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGTGGTGCTGCG
TTGCGGTTT----
 A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G G T A C A C T G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T