Information for 5-TAWACATATGTATATA (Motif 13)

A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A
Reverse Opposite:
A C G T C T G A G C A T C G T A A G C T C G T A G T A C C G T A A G C T T C G A A C G T A C T G A C G T C G A T G A C T G T C A
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.722
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets35.1 +/- 15.3bp
Average Position of motif in Background51.2 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TAWACATATGTATATA
YATGCATATRCATRT-
 A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TAWACATATGTATATA
--ACCATATGTT----
 A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TAWACATATGTATATA
---CCATATGT-----
 A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A
A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TAWACATATGTATATA
-NAACATCTGGATN--
 A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A
A C G T T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TAWACATATGTATATA
-NAACATATGTTT---
 A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A
A C G T G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAWACATATGTATATA
--AACATATGTT----
 A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A
A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAWACATATGTATATA
--AACATATGTC----
 A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A
A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAWACATATGTATATA-----
---ACATCTGGWWTYAATTAR
 A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

PH0082.1_Irx2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAWACATATGTATATA-
TAAATACATGTAAAATT
 A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAWACATATGTATATA
ANTTNTACATGTANTTN
 A C G T A C G T C T G A G C T A G T C A G T A C C G T A A C G T T C G A A C G T A C T G C G A T C T G A C G A T C G T A G A C T T G C A
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T