Information for 9-AAAAGAASCCAAA (Motif 11)

C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A T C G A C T G A T G C C G A T C A G T A T G C C G A T A C G T A C G T C G A T
p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.816
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.6 +/- 17.9bp
Average Position of motif in Background66.4 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAAAGAASCCAAA--
---AGAAACGAAAGT
 C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAAGAASCCAAA-
CAAAAGTAAACAAAG
 A C G T C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAAGAASCCAAA
CAAAATCGAAACTAA-
 A C G T A C G T A C G T C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AAAAGAASCCAAA
------TGCCAA-
 C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAAGAASCCAAA----
--ATAAACCGAAACCAA
 C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAAGAASCCAAA---
--GAGAACCGAAACTG
 C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

IRF9/MA0653.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAAAGAASCCAAA---
-AACGAAACCGAAACT
 C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AAAAGAASCCAAA
GGAAANTGAAACTNA-
 A C G T A C G T A C G T C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AAAAGAASCCAAA
----CGTGCCAAG
 C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAAAGAASCCAAA-----
---CGTATCGAAACCAAA
 C G T A C G T A G T C A C G T A T A C G G C T A C G T A T A C G A G T C A T G C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A