Information for 5-GAGGGTGCTGTCT (Motif 9)

A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T
Reverse Opposite:
G T C A C T A G C G T A A T G C C G T A A C T G A G T C T C G A A G T C A G T C G T A C A G C T A G T C
p-value:1e-12
log p-value:-2.773e+01
Information Content per bp:1.859
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.2 +/- 16.9bp
Average Position of motif in Background45.4 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GAGGGTGCTGTCT--
-----TGCTGACTCA
 A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGTGCTGTCT-
AGATGCTRCTRCCHT
 A C G T A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGGTGCTGTCT
-AAAATGCTGACT
 A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGGTGCTGTCT
-AATTTGCTGAC-
 A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAGGGTGCTGTCT
------GCTGTG-
 A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGGGTGCTGTCT
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGGTGCTGTCT----
AAATTTGCTGACTTAGA
 A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGGGTGCTGTCT----
--GGGCGATGACCAYTC
 A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGTGCTGTCT
NNVDGGGYGGGGCYN
 A C G T A C G T A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAGGGTGCTGTCT
-----NGCTN---
 A C T G C T G A A C T G A C T G A C T G A G C T A C T G G T A C A C G T A T C G C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T