Information for 4-CCASACGGYGSTK (Motif 8)

A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
Reverse Opposite:
G T A C C G T A A T G C A G T C C T G A A T G C A G T C A C T G A C G T A T C G A C G T A C T G A C T G
p-value:1e-13
log p-value:-3.011e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 18.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCASACGGYGSTK
CCAGACAG-----
 A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCASACGGYGSTK
CCAGACRSVB---
 A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCASACGGYGSTK
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCASACGGYGSTK
ATGCCAGACN------
 A C G T A C G T A C G T A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCASACGGYGSTK
AACAKATGGY----
 A C G T A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCASACGGYGSTK
ACCATATGGT----
 A C G T A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCASACGGYGSTK--
---NTCGGTGGTCGC
 A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCASACGGYGSTK
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCASACGGYGSTK
AACAGATGGC----
 A C G T A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCASACGGYGSTK
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T G C C G T A G T A C A C T G A T C G A G C T A C T G A T C G A C G T A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T