Information for 2-CTSCCCASKGCAGKGC (Motif 3)

A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C
Reverse Opposite:
A C T G T G A C G T A C A G T C A C G T A C T G A G T C G T C A A T C G G A C T A C T G A C T G A C T G A T C G C G T A A C T G
p-value:1e-15
log p-value:-3.645e+01
Information Content per bp:1.788
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 22.8bp
Average Position of motif in Background55.3 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTSCCCASKGCAGKGC----
---NNNANTGCAGTGCNNTT
 A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTSCCCASKGCAGKGC
TTTGCACACGGCAC---
 A C G T A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTSCCCASKGCAGKGC-
--CCACACAGCAGGAGA
 A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTSCCCASKGCAGKGC
GTCCCCAGGGGA----
 A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CTSCCCASKGCAGKGC-
-----CACAGCAGGGGG
 A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTSCCCASKGCAGKGC
-TCCCCA---------
 A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTSCCCASKGCAGKGC-
--CCACACAGCAGGAGA
 A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTSCCCASKGCAGKGC
TGCCCCAGGGCA----
 A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CTSCCCASKGCAGKGC
TTATCTGNNNNCNNCAGCNG
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C
G A C T G C A T C T G A A C G T A G T C C G A T A T C G G A C T A T C G T A G C T A G C T A G C G T A C T A C G G T A C C G T A A T C G T A G C G A T C A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CTSCCCASKGCAGKGC---
----DCHCAGCAGGRGGCC
 A G T C A C G T A T G C A G T C T G A C A G T C C G T A A T G C A C G T A C T G A G T C C G T A C T A G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C