Information for 13-GGTGGTCAAC (Motif 21)

A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A A G T C G T A C G T C A A G T C A G T C
p-value:1e-7
log p-value:-1.644e+01
Information Content per bp:1.925
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets38.5 +/- 29.7bp
Average Position of motif in Background48.5 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GGTGGTCAAC---
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGTCAAC--
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGTGGTCAAC
AGRGGTCA--
 A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTCAAC
NTCGGTGGTCGC-
 A C G T A C G T A C G T A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTCAAC
TTCGGTGGTCGC-
 A C G T A C G T A C G T A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGTGGTCAAC---
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGTGGTCAAC
TCGGTGGTCGCN
 A C G T A C G T A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGTGGTCAAC---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGTGGTCAAC
CGTGGGTGGTCC--
 A C G T A C G T A C G T A C G T A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGTGGTCAAC
--AGGTCA--
 A C T G A C T G C A G T A C T G A C T G A C G T A G T C C G T A C G T A A G T C
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T